STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_12179RRM domain-containing protein. (381 aa)    
Predicted Functional Partners:
Bin1
Histone deacetylase complex subunit SAP18.
   
 0.998
C0J52_00527
RRM domain-containing protein.
   
 0.998
eIF4AIII
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.997
Upf1
Regulator of nonsense transcripts 1.
    
 0.994
tsu
RNA-binding protein 8A.
   
 0.990
C0J52_20648
Uncharacterized protein.
   
 0.990
UPF2
Regulator of nonsense transcripts 2.
    
 0.990
C0J52_09814
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.990
C0J52_10707
Uncharacterized protein.
    
 0.990
Cstf2
Cleavage stimulation factor subunit 2.
   
 0.988
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.