STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_04954PB1 domain-containing protein. (493 aa)    
Predicted Functional Partners:
SEC31A
Protein transport protein Sec31A.
   
 0.939
C0J52_22651
Uncharacterized protein.
    
 0.887
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.814
Sec13
Protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.814
Sec23a
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.813
C0J52_00838
Uncharacterized protein.
   
 0.812
C0J52_05764
Uncharacterized protein.
   
 0.760
sec22bb
Vesicle-trafficking protein SEC22b-B; Belongs to the synaptobrevin family.
   
  0.756
C0J52_27978
Uncharacterized protein.
    
  0.736
C0J52_27657
Uncharacterized protein.
    
  0.736
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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