STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nelf-ANegative elongation factor A. (454 aa)    
Predicted Functional Partners:
TH1
Negative elongation factor D.
    
 0.996
C0J52_08709
Uncharacterized protein.
   
 0.996
Nelf-E
Negative elongation factor E.
   
 0.995
RpII140
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.985
Polr2c
DNA-directed RNA polymerase II subunit RPB3.
    
 0.984
RpII15
DNA-directed RNA polymerase II subunit RPB9.
    
  0.981
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.973
POLR2E
DNA-directed RNA polymerases I.
    
  0.971
Rpb11
DNA-directed RNA polymerase II subunit RPB11.
    
  0.964
C0J52_24854
Uncharacterized protein.
   
 0.961
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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