STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_06019Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
C0J52_16837
Uncharacterized protein.
   
 0.953
Pabp2
Polyadenylate-binding protein 2.
   
 0.869
C0J52_01677
Uncharacterized protein.
   
 0.839
C0J52_06069
WD_REPEATS_REGION domain-containing protein.
    
 0.815
PRPF19
Pre-mRNA-processing factor 19.
   
 0.813
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.812
C0J52_27415
Uncharacterized protein.
    
 0.805
Itsn1
Intersectin-1.
    
  0.803
Slu7
Pre-mRNA-splicing factor Slu7.
    
 0.794
Wdr46
WD repeat-containing protein 46.
   
 0.791
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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