STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_21889Uncharacterized protein. (1888 aa)    
Predicted Functional Partners:
Mlh1
DNA mismatch repair protein Mlh1.
    
 0.997
MSH2
DNA mismatch repair protein Msh2.
  
 0.930
spel1
DNA mismatch repair protein spellchecker 1.
  
 0.930
C0J52_22282
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.906
C0J52_00468
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.906
C0J52_01554
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.906
MSH3
DNA mismatch repair protein Msh3.
  
 0.896
C0J52_01763
Uncharacterized protein.
  
 0.896
C0J52_13026
Uncharacterized protein.
    
   0.885
VTA1
Vacuolar protein sorting-associated protein VTA1.
    
   0.885
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.