Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCD3_1 | ABCD3_2 | A0A2P8ZE06 | A0A2P8YXM0 | ATP-binding cassette sub-family D member 3. | ATP-binding cassette sub-family D member 3. | 0.934 |
ABCD3_1 | C0J52_05142 | A0A2P8ZE06 | A0A2P8ZAA2 | ATP-binding cassette sub-family D member 3. | RING-type domain-containing protein. | 0.738 |
ABCD3_1 | C0J52_07904 | A0A2P8ZE06 | A0A2P8Y3J6 | ATP-binding cassette sub-family D member 3. | SH3 domain-containing protein. | 0.800 |
ABCD3_1 | C0J52_18958 | A0A2P8ZE06 | A0A2P8XH69 | ATP-binding cassette sub-family D member 3. | RECA_2 domain-containing protein. | 0.887 |
ABCD3_1 | PEX11G | A0A2P8ZE06 | A0A2P8ZPK3 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein 11C. | 0.765 |
ABCD3_1 | PEX14 | A0A2P8ZE06 | A0A2P8XUN7 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PEX14. | 0.734 |
ABCD3_1 | Pex12 | A0A2P8ZE06 | A0A2P8Y1F9 | ATP-binding cassette sub-family D member 3. | Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. | 0.775 |
ABCD3_1 | RAD51 | A0A2P8ZE06 | A0A2P8XWP0 | ATP-binding cassette sub-family D member 3. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.953 |
ABCD3_1 | SLC25A17 | A0A2P8ZE06 | A0A2P8Y5H5 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.766 |
ABCD3_1 | pex16 | A0A2P8ZE06 | A0A2P8ZPQ0 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PEX16. | 0.804 |
ABCD3_2 | ABCD3_1 | A0A2P8YXM0 | A0A2P8ZE06 | ATP-binding cassette sub-family D member 3. | ATP-binding cassette sub-family D member 3. | 0.934 |
ABCD3_2 | C0J52_05142 | A0A2P8YXM0 | A0A2P8ZAA2 | ATP-binding cassette sub-family D member 3. | RING-type domain-containing protein. | 0.804 |
ABCD3_2 | C0J52_07904 | A0A2P8YXM0 | A0A2P8Y3J6 | ATP-binding cassette sub-family D member 3. | SH3 domain-containing protein. | 0.899 |
ABCD3_2 | C0J52_18958 | A0A2P8YXM0 | A0A2P8XH69 | ATP-binding cassette sub-family D member 3. | RECA_2 domain-containing protein. | 0.443 |
ABCD3_2 | PEX11G | A0A2P8YXM0 | A0A2P8ZPK3 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein 11C. | 0.887 |
ABCD3_2 | PEX14 | A0A2P8YXM0 | A0A2P8XUN7 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PEX14. | 0.791 |
ABCD3_2 | Pex12 | A0A2P8YXM0 | A0A2P8Y1F9 | ATP-binding cassette sub-family D member 3. | Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. | 0.859 |
ABCD3_2 | RAD51 | A0A2P8YXM0 | A0A2P8XWP0 | ATP-binding cassette sub-family D member 3. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.443 |
ABCD3_2 | SLC25A17 | A0A2P8YXM0 | A0A2P8Y5H5 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.827 |
ABCD3_2 | pex16 | A0A2P8YXM0 | A0A2P8ZPQ0 | ATP-binding cassette sub-family D member 3. | Peroxisomal membrane protein PEX16. | 0.797 |
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