Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0J52_00685 | C0J52_03176 | A0A2P8ZK66 | A0A2P8ZGN7 | Uncharacterized protein. | Uncharacterized protein. | 0.952 |
C0J52_00685 | C0J52_07908 | A0A2P8ZK66 | A0A2P8Z4B5 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.977 |
C0J52_00685 | C0J52_13113 | A0A2P8ZK66 | A0A2P8YZQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.893 |
C0J52_00685 | C0J52_13266 | A0A2P8ZK66 | A0A2P8XVW8 | Uncharacterized protein. | PWI domain-containing protein. | 0.980 |
C0J52_00685 | C0J52_16837 | A0A2P8ZK66 | A0A2P8XPA7 | Uncharacterized protein. | Uncharacterized protein. | 0.666 |
C0J52_00685 | C0J52_24454 | A0A2P8ZK66 | A0A2P8XR87 | Uncharacterized protein. | Uncharacterized protein. | 0.953 |
C0J52_00685 | DDX23 | A0A2P8ZK66 | A0A2P8YLH3 | Uncharacterized protein. | Putative ATP-dependent RNA helicase DDX23. | 0.877 |
C0J52_00685 | SF3B1 | A0A2P8ZK66 | A0A2P8XDH7 | Uncharacterized protein. | Splicing factor 3B subunit 1. | 0.964 |
C0J52_00685 | SF3B3 | A0A2P8ZK66 | A0A2P8YN62 | Uncharacterized protein. | Splicing factor 3B subunit 3. | 0.798 |
C0J52_03176 | C0J52_00685 | A0A2P8ZGN7 | A0A2P8ZK66 | Uncharacterized protein. | Uncharacterized protein. | 0.952 |
C0J52_03176 | C0J52_07908 | A0A2P8ZGN7 | A0A2P8Z4B5 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.946 |
C0J52_03176 | C0J52_13113 | A0A2P8ZGN7 | A0A2P8YZQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
C0J52_03176 | C0J52_13266 | A0A2P8ZGN7 | A0A2P8XVW8 | Uncharacterized protein. | PWI domain-containing protein. | 0.995 |
C0J52_03176 | C0J52_16837 | A0A2P8ZGN7 | A0A2P8XPA7 | Uncharacterized protein. | Uncharacterized protein. | 0.975 |
C0J52_03176 | C0J52_20648 | A0A2P8ZGN7 | A0A2P8YAQ2 | Uncharacterized protein. | Uncharacterized protein. | 0.933 |
C0J52_03176 | C0J52_24454 | A0A2P8ZGN7 | A0A2P8XR87 | Uncharacterized protein. | Uncharacterized protein. | 0.970 |
C0J52_03176 | DDX23 | A0A2P8ZGN7 | A0A2P8YLH3 | Uncharacterized protein. | Putative ATP-dependent RNA helicase DDX23. | 0.941 |
C0J52_03176 | SF3B1 | A0A2P8ZGN7 | A0A2P8XDH7 | Uncharacterized protein. | Splicing factor 3B subunit 1. | 0.949 |
C0J52_03176 | SF3B3 | A0A2P8ZGN7 | A0A2P8YN62 | Uncharacterized protein. | Splicing factor 3B subunit 3. | 0.962 |
C0J52_07908 | C0J52_00685 | A0A2P8Z4B5 | A0A2P8ZK66 | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | Uncharacterized protein. | 0.977 |
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