STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_02684Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
C0J52_17201
ANK_REP_REGION domain-containing protein.
      
 0.579
C0J52_04605
GRIP domain-containing protein.
      
 0.567
mRpL51
39S ribosomal protein L51.
      
 0.549
PHLDB2
Pleckstrin-like domain family B member 2.
      
 0.512
ccnl1
Cyclin-L1; Belongs to the cyclin family.
   
  
 0.483
CCNL1
Cyclin-L1.
   
  
 0.483
C0J52_19402
Uncharacterized protein.
      
 0.477
C0J52_15417
PID domain-containing protein.
    
 
 0.471
Rfc5
Replication factor C subunit 5.
   
 
 0.447
MED6
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.406
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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