STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_02695BTB domain-containing protein. (212 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome complex subunit 3.
    
  0.667
KLHL10
Kelch-like protein 10.
    
  0.664
cops2
COP9 signalosome complex subunit 2.
   
  0.657
CSN5
COP9 signalosome complex subunit 5.
    
  0.646
Roc1a
RING-box protein 1A.
    
 0.636
Cul1
Cullin-1; Belongs to the cullin family.
    
 0.630
cul3
Cullin-3; Belongs to the cullin family.
    
 0.630
Cops4
COP9 signalosome complex subunit 4.
    
  0.626
COPS6
COP9 signalosome complex subunit 6.
    
  0.617
UBE2F
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.614
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.