STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_05034DUF2052 domain-containing protein. (384 aa)    
Predicted Functional Partners:
C0J52_20717
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 
 0.955
SF3B1
Splicing factor 3B subunit 1.
    
 
 0.933
SF3B3
Splicing factor 3B subunit 3.
    
 
 0.925
C0J52_23951
Splicing factor 3B subunit 6-like protein.
    
 
 0.913
C0J52_14882
Splicing factor 3B subunit 6-like protein.
    
 
 0.913
C0J52_16837
Uncharacterized protein.
   
 
 0.850
Sf3a1
Splicing factor 3A subunit 1.
   
 
 0.713
SF3A2
Splicing factor 3A subunit 2.
   
 
 0.696
Sf3b4
Splicing factor 3B subunit 4.
    
 
 0.678
C0J52_01081
Uncharacterized protein.
    
 
 0.592
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.