STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77547.1PFAM: Lipase, GDSL; KEGG: tbo:Thebr_2250 G-D-S-L family lipolytic protein. (241 aa)    
Predicted Functional Partners:
AEM79741.1
Hypothetical protein; KEGG: tbo:Thebr_2254 peptidoglycan-binding domain 1 protein.
 
   0.718
AEM79720.1
KEGG: afw:Anae109_3331 carbohydrate-binding family 6 protein; manually curated; PFAM: Carbohydrate binding domain, family 6.
  
 
 0.665
AEM78446.1
KEGG: tit:Thit_0866 hypothetical protein.
  
    0.593
AEM79791.1
KEGG: tbo:Thebr_0260 hypothetical protein.
  
     0.566
AEM79266.1
Hypothetical protein; Manually curated; KEGG: tte:TTE1567 hypothetical protein.
  
     0.495
AEM77589.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_2223 hypothetical protein.
   
 
 0.461
AEM77963.1
Hypothetical protein; Manually curated.
  
   0.457
AEM78270.1
KEGG: thx:Thet_0686 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677.
  
   0.457
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.448
AEM79463.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.418
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.