Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEM77575.1KEGG: tbo:Thebr_2240 hypothetical protein. (90 aa)    
Predicted Functional Partners:
AEM77576.1
KEGG: tbo:Thebr_2239 pro-sigmaK processing inhibitor BofA; TIGRFAM: SigmaK-factor processing regulatory BofA; PFAM: SigmaK-factor processing regulatory BofA.
 
    0.888
AEM78982.1
KEGG: tbo:Thebr_0859 hypothetical protein.
  
     0.726
AEM78585.1
KEGG: tmt:Tmath_1069 hypothetical protein.
  
     0.721
AEM78707.1
KEGG: thx:Thet_1326 hypothetical protein.
  
     0.717
AEM77672.1
PFAM: Protein of unknown function DUF1779; KEGG: tmt:Tmath_0192 protein of unknown function DUF1779.
  
     0.714
AEM78566.1
KEGG: tmt:Tmath_1051 hypothetical protein.
  
     0.691
AEM79979.1
PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: tbo:Thebr_0105 peptidase M1 membrane alanine aminopeptidase.
  
     0.665
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.656
AEM78050.1
KEGG: thx:Thet_0524 hypothetical protein.
  
     0.645
AEM77621.1
KEGG: tte:TTE0101 hypothetical protein.
  
     0.643
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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