STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77576.1KEGG: tbo:Thebr_2239 pro-sigmaK processing inhibitor BofA; TIGRFAM: SigmaK-factor processing regulatory BofA; PFAM: SigmaK-factor processing regulatory BofA. (90 aa)    
Predicted Functional Partners:
AEM77575.1
KEGG: tbo:Thebr_2240 hypothetical protein.
 
    0.892
AEM78585.1
KEGG: tmt:Tmath_1069 hypothetical protein.
  
     0.743
AEM78715.1
KEGG: tbo:Thebr_1175 hypothetical protein.
  
     0.743
AEM79685.1
KEGG: aoe:Clos_0429 hypothetical protein.
  
     0.695
AEM79673.1
PFAM: Sodium ion-translocating decarboxylase; KEGG: tbo:Thebr_0316 sodium pump decarboxylase subunit gamma.
  
     0.681
AEM77635.1
KEGG: tbo:Thebr_2180 hypothetical protein.
  
     0.646
AEM78685.1
KEGG: tbo:Thebr_1145 stage II sporulation protein M; TIGRFAM: Sporulation stage II, protein M; PFAM: Protein of unknown function DUF95, transmembrane.
  
   
 0.600
AEM79432.1
KEGG: tit:Thit_1853 hypothetical protein.
  
     0.598
AEM77577.1
KEGG: tbo:Thebr_2238 hypothetical protein.
       0.566
AEM77672.1
PFAM: Protein of unknown function DUF1779; KEGG: tmt:Tmath_0192 protein of unknown function DUF1779.
  
     0.566
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.