STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77593.1KEGG: tmt:Tmath_0120 YhgE/Pip N-terminal domain protein; TIGRFAM: Phage infection protein, YhgE, C-terminal; Phage infection protein, YhgE, N-terminal; PFAM: ABC-2 type transporter. (738 aa)    
Predicted Functional Partners:
AEM77592.1
PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tit:Thit_0060 transcriptional regulator, TetR family.
 
  
 0.687
AEM78913.1
PFAM: Domain of unknown function DUF2357; Protein of unknown function DUF524; KEGG: thx:Thet_1112 hypothetical protein.
  
     0.513
AEM78914.1
PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: tmt:Tmath_1395 ATPase associated with various cellular activities AAA_5.
  
     0.502
AEM79367.1
KEGG: thx:Thet_1886 hypothetical protein.
 
    0.495
AEM77591.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tbo:Thebr_2221 short-chain dehydrogenase/reductase SDR.
  
   0.482
AEM77594.1
KEGG: tit:Thit_0062 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; Fibronectin, type III; Glycoside hydrolase, carbohydrate-binding; S-layer homology region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; Alpha-amylase, C-terminal all beta; Fibronectin, type III; Belongs to the glycosyl hydrolase 13 family.
       0.417
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.