Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEM77612.1PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_2198 Orn/Lys/Arg decarboxylase major region. (473 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
  
 0.864
AEM77614.1
PFAM: Protein of unknown function DUF970; KEGG: tbo:Thebr_2196 hypothetical protein.
  
    0.810
AEM77615.1
PFAM: Protein of unknown function DUF327; KEGG: tbo:Thebr_2195 hypothetical protein.
  
    0.804
AEM77617.1
PSP1 domain protein; PFAM: PSP1, C-terminal; KEGG: tbo:Thebr_2193 PSP1 domain-containing protein.
  
    0.803
AEM77616.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tbo:Thebr_2194 DNA polymerase III subunit delta'.
       0.788
AEM78743.1
PFAM: Aluminium resistance; KEGG: tbo:Thebr_1210 aluminum resistance family protein.
 
   
 0.704
AEM77611.1
PFAM: Sigma-G inhibitor, Gin; KEGG: tbo:Thebr_2199 sigma-G inhibitor, Gin.
       0.605
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
 0.545
AEM78712.1
Agmatinase; KEGG: tbo:Thebr_1172 agmatinase; TIGRFAM: Putative agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
 
  
 0.476
AEM78587.1
PFAM: Radical SAM; KEGG: tmt:Tmath_1071 radical SAM domain protein.
 
     0.462
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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