Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEM77615.1PFAM: Protein of unknown function DUF327; KEGG: tbo:Thebr_2195 hypothetical protein. (146 aa)    
Predicted Functional Partners:
AEM77614.1
PFAM: Protein of unknown function DUF970; KEGG: tbo:Thebr_2196 hypothetical protein.
  
    0.896
AEM77617.1
PSP1 domain protein; PFAM: PSP1, C-terminal; KEGG: tbo:Thebr_2193 PSP1 domain-containing protein.
  
  
 0.864
AEM77616.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tbo:Thebr_2194 DNA polymerase III subunit delta'.
       0.835
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.812
AEM77612.1
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_2198 Orn/Lys/Arg decarboxylase major region.
  
    0.804
AEM78019.1
TIGRFAM: flagellar operon protein TIGR03826; KEGG: tbo:Thebr_1832 flagellar operon protein YvyF.
 
     0.787
AEM78021.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1830 FlgN family protein.
 
     0.787
AEM78789.1
PFAM: Protein of unknown function DUF342; KEGG: thx:Thet_1237 hypothetical protein.
  
     0.721
AEM78796.1
PFAM: Type IV pilus assembly PilZ; KEGG: thx:Thet_1230 type IV pilus assembly PilZ.
  
     0.705
AEM78296.1
PFAM: Protein of unknown function DUF2225; KEGG: tbo:Thebr_1586 hypothetical protein.
 
     0.683
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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