STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77617.1PSP1 domain protein; PFAM: PSP1, C-terminal; KEGG: tbo:Thebr_2193 PSP1 domain-containing protein. (293 aa)    
Predicted Functional Partners:
AEM77615.1
PFAM: Protein of unknown function DUF327; KEGG: tbo:Thebr_2195 hypothetical protein.
  
  
 0.875
rny
2,3 cyclic-nucleotide 2-phosphodiesterase; Endoribonuclease that initiates mRNA decay.
 
  
 0.872
AEM77616.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tbo:Thebr_2194 DNA polymerase III subunit delta'.
  
   0.865
AEM77614.1
PFAM: Protein of unknown function DUF970; KEGG: tbo:Thebr_2196 hypothetical protein.
  
    0.858
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.824
AEM77612.1
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_2198 Orn/Lys/Arg decarboxylase major region.
  
    0.813
AEM77611.1
PFAM: Sigma-G inhibitor, Gin; KEGG: tbo:Thebr_2199 sigma-G inhibitor, Gin.
       0.581
fliE
TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: tbo:Thebr_1287 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE.
   
   0.536
AEM77688.1
PFAM: Flagellar protein FlgJ, N-terminal; KEGG: tbo:Thebr_2137 flagellar protein FlgJ-like protein.
    
   0.524
AEM78812.1
PFAM: Flagellar hook capping protein; KEGG: tbo:Thebr_1279 flagellar hook capping protein.
    
   0.524
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.