Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AEM77637.1S-layer domain-containing protein; PFAM: S-layer homology region; KEGG: tit:Thit_0105 S-layer domain protein. (422 aa)    
Predicted Functional Partners:
AEM77638.1
KEGG: tmt:Tmath_0163 hypothetical protein.
 
   
 0.905
AEM78056.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: tmt:Tmath_0589 copper amine oxidase domain protein.
 
    0.780
AEM79918.1
KEGG: tmt:Tmath_2165 copper amine oxidase domain protein; PFAM: Copper amine oxidase-like, N-terminal; SH3, type 3; SMART: Bacterial SH3-like region.
 
    0.773
AEM78373.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: toc:Toce_1668 copper amine oxidase domain protein.
 
    0.759
sigI
RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
 
    0.755
AEM79970.1
PFAM: Protein of unknown function YycH; KEGG: tit:Thit_2308 protein of unknown function YycH.
  
     0.744
AEM78014.1
KEGG: tit:Thit_0459 hypothetical protein.
  
     0.729
AEM79430.1
KEGG: tmt:Tmath_1826 polysaccharide pyruvyl transferase CsaB; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
  
   
 0.724
AEM79432.1
KEGG: tit:Thit_1853 hypothetical protein.
  
     0.704
AEM78953.1
TIGRFAM: Uncharacterised conserved protein UCP02828, putative membrane fusion protein; KEGG: tbo:Thebr_0892 membrane fusion protein.
  
 
 
 0.683
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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