STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77675.1KEGG: tte:TTE0160 hypothetical protein. (120 aa)    
Predicted Functional Partners:
AEM77674.1
Oligopeptide transporter, OPT family; KEGG: tte:TTE0159 hypothetical protein; TIGRFAM: Oligopeptide transporter OPT; Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily.
 
     0.917
AEM77736.1
KEGG: tmt:Tmath_0923 oligopeptide transporter, OPT family; TIGRFAM: Oligopeptide transporter OPT; Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily.
 
     0.794
AEM77676.1
KEGG: tbo:Thebr_2145 alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal.
       0.511
AEM79727.1
PFAM: PBS lyase HEAT-like repeat; KEGG: aoe:Clos_0613 heat repeat-containing PBS lyase.
  
     0.415
AEM79977.1
KEGG: tbo:Thebr_0107 primosome, DnaD subunit; TIGRFAM: DnaD/phage-associated region; PFAM: DnaD/phage-associated region.
  
     0.406
AEM79068.1
KEGG: tbo:Thebr_0778 hypothetical protein.
  
     0.403
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.