STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77703.1PFAM: Malate/L-lactate dehydrogenase; KEGG: Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (345 aa)    
Predicted Functional Partners:
AEM77704.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: agr:AGROH133_14211 short chain alcohol dehydrogenase-related dehydrogenase.
  
  
 0.678
AEM77705.1
Hypothetical protein.
       0.668
AEM77701.1
PFAM: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: tit:Thit_0499 phosphotransferase system lactose/cellobiose-specific IIB subunit.
       0.545
AEM77702.1
PFAM: Phosphotransferase system, galactitol-specific IIC component; KEGG: tte:TTE0183 hypothetical protein.
       0.545
AEM77706.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: thx:Thet_0160 phosphoglycerate dehydrogenase.
     
 0.462
AEM77707.1
PFAM: SAF domain; KEGG: tbo:Thebr_2122 SAF domain-containing protein.
       0.412
AEM77708.1
KEGG: thx:Thet_0162 altronate dehydratase; manually curated; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal.
       0.412
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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