STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77745.1KEGG: tit:Thit_0209 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (242 aa)    
Predicted Functional Partners:
AEM77746.1
KEGG: thx:Thet_0228 cobalt ABC transporter inner membrane subunit CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein.
 
 0.997
AEM77748.1
PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: thx:Thet_0230 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 0.996
AEM77747.1
KEGG: tit:Thit_0211 hypothetical protein.
 
 0.992
ecfT
ABC-type transporter, integral membrane subunit; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.945
AEM77749.1
Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
     
 0.787
AEM78315.1
PFAM: BioY protein; KEGG: tbo:Thebr_1568 BioY protein.
   
 
 0.748
AEM79671.1
KEGG: tbo:Thebr_0318 hypothetical protein.
   
 
 0.715
AEM78454.1
PFAM: Protein of unknown function DUF1393; KEGG: thx:Thet_0840 hypothetical protein.
   
 
 0.616
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.572
AEM77757.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tbo:Thebr_2062 hypothetical protein.
 
    0.533
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.