STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77775.1KEGG: tte:TTE0277 cellulose biosynthesis protein. (369 aa)    
Predicted Functional Partners:
AEM77774.1
PFAM: SNARE associated Golgi protein; KEGG: tbo:Thebr_2049 SNARE associated Golgi protein-like protein.
 
     0.824
AEM77679.1
KEGG: tte:TTE0165 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; Fibronectin, type III; SMART: Fibronectin, type III; Cell surface receptor IPT/TIG.
  
     0.724
AEM77772.1
KEGG: tbo:Thebr_2051 hypothetical protein.
 
     0.716
AEM79038.1
KEGG: tbo:Thebr_0806 hypothetical protein.
  
     0.703
AEM78646.1
KEGG: tbo:Thebr_1106 hypothetical protein.
  
     0.673
AEM78011.1
PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; KEGG: tmt:Tmath_0547 spore germination protein-like protein.
  
     0.654
AEM77827.1
KEGG: thx:Thet_0286 aminopeptidase-like protein.
  
     0.636
AEM79382.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
  
     0.605
AEM77773.1
KEGG: tmt:Tmath_0317 glycogen synthase; TIGRFAM: Glycogen synthase, corynebacterial; PFAM: Glycosyl transferase, group 1.
  
  
 0.580
AEM78576.1
KEGG: tbo:Thebr_1037 hypothetical protein.
  
     0.567
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.