STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77791.1ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: thx:Thet_0269 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (396 aa)    
Predicted Functional Partners:
AEM77789.1
KEGG: thx:Thet_0267 periplasmic sugar-binding protein.
  
 0.957
AEM77790.1
KEGG: thx:Thet_0268 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
 0.954
AEM77788.1
KEGG: thx:Thet_0266 monosaccharide-transporting ATPase.
  
 0.900
AEM77785.1
KEGG: thx:Thet_0263 periplasmic-binding protein/LacI transcriptional regulator.
 
  
 0.866
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.829
AEM79459.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: str:Sterm_3541 periplasmic binding protein/LacI transcriptional regulator.
  
 0.818
AEM77787.1
KEGG: tmt:Tmath_0327 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; Signal transduction response regulator, receiver region.
 
     0.626
AEM77786.1
KEGG: thx:Thet_0264 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATP-binding region, ATPase-like; SMART: HAMP linker domain; ATP-binding region, ATPase-like.
 
   
 0.590
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.