STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77833.1PFAM: Bile acid:sodium symporter; KEGG: shc:Shell_0131 bile acid:sodium symporter. (331 aa)    
Predicted Functional Partners:
AEM78522.1
Protein tyrosine phosphatase; TIGRFAM: Arsenate reductase StaphA (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: thx:Thet_1488 arsenate reductase (thioredoxin); SMART: Protein-tyrosine phosphatase, low molecular weight.
 
  
 0.856
AEM77828.1
KEGG: thx:Thet_0287 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
  
 0.556
AEM77832.1
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: sgy:Sgly_3308 C4-dicarboxylate transporter/malic acid transport protein.
       0.527
AEM77666.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; Protein-tyrosine phosphatase, low molecular weight; KEGG: tit:Thit_0129 sugar-phosphate isomerase, RpiB/LacA/LacB family; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
  
 0.456
AEM78968.1
KEGG: thx:Thet_0287 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
  
 0.422
AEM77830.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tpd:Teth39_1967 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
     
 0.400
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.