STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlpKEGG: tbo:Thebr_1998 small, acid-soluble spore protein tlp; TIGRFAM: Small acid-soluble spore protein, thioredoxin-like; HAMAP: Small, acid-soluble spore protein tlp; Belongs to the Tlp family. (89 aa)    
Predicted Functional Partners:
sspI
TIGRFAM: Small acid-soluble spore protein, SspI; KEGG: tbo:Thebr_0995 small, acid-soluble spore protein I; Belongs to the SspI family.
  
    0.667
AEM79266.1
Hypothetical protein; Manually curated; KEGG: tte:TTE1567 hypothetical protein.
  
     0.655
AEM79437.1
KEGG: tbo:Thebr_0498 outer membrane lipoprotein-sorting protein-like protein.
  
    0.560
AEM77584.1
PFAM: Beta-galactosidase trimerisation; Glycoside hydrolase, family 5; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.552
AEM77733.1
PFAM: GCN5-related N-acetyltransferase; KEGG: tit:Thit_0202 GCN5-related N-acetyltransferase.
  
     0.551
AEM79669.1
KEGG: tbo:Thebr_0320 spore germination protein; TIGRFAM: Spore germination GerAB; PFAM: Spore germination GerAB.
  
     0.511
AEM78702.1
KEGG: tbo:Thebr_1160 hypothetical protein.
  
    0.496
AEM78656.1
KEGG: tbo:Thebr_1116 stage III sporulation protein AB; TIGRFAM: Sporulation stage III, protein AB; PFAM: Sporulation stage III, protein AB.
  
   
 0.491
AEM77850.1
PFAM: Phosphate transporter; KEGG: tmt:Tmath_0366 phosphate transporter.
       0.483
AEM79686.1
TIGRFAM: Sporulation stage II, protein E; PFAM: Sporulation stage II, protein E C-terminal; KEGG: thx:Thet_2127 protein serine/threonine phosphatase; SMART: Protein phosphatase 2C-related.
  
     0.470
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.