Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM77908.1PFAM: Deoxyribonuclease, TatD-related; KEGG: tit:Thit_0332 TatD-related deoxyribonuclease. (253 aa)    
Predicted Functional Partners:
AEM77907.1
KEGG: tbo:Thebr_1962 sulfite reductase subunit C; TIGRFAM: Sulphite reductase, subunit C; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
       0.556
AEM77909.1
PFAM: Protein of unknown function DUF2250; KEGG: tbo:Thebr_1960 hypothetical protein.
       0.547
AEM77906.1
KEGG: tbo:Thebr_1963 sulfite reductase subunit B; TIGRFAM: Sulphite reductase, subunit B; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain.
       0.526
AEM77905.1
TIGRFAM: Sulphite reductase, subunit A; KEGG: tbo:Thebr_1964 sulfite reductase subunit A.
       0.470
AEM79782.1
Helix-turn-helix domain protein; KEGG: dau:Daud_0777 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.445
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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