Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM77939.1ABC transporter related protein; KEGG: tte:TTE0398 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (242 aa)    
Predicted Functional Partners:
AEM79270.1
PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein.
 
  
 0.816
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.499
AEM79407.1
PFAM: ABC-2 type transporter; KEGG: tbo:Thebr_0521 ABC-2 type transporter.
 
 
 0.458
AEM80009.1
KEGG: tte:TTE2353 ABC-type multidrug/protein/lipid transport system, ATPase component; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core.
  
0.452
AEM80007.1
ABC transporter transmembrane region; KEGG: tte:TTE2769 ABC-type multidrug/protein/lipid transport system, ATPase component; manually curated; PFAM: ABC transporter, transmembrane region.
  
0.449
AEM77957.1
KEGG: tbo:Thebr_1900 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
  
 0.440
AEM77591.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tbo:Thebr_2221 short-chain dehydrogenase/reductase SDR.
  
 
 0.438
AEM80004.1
KEGG: cpo:COPRO5265_0264 ABC-type multidrug/protein/lipid transport system, ATPase component; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core.
  
0.435
cysS
KEGG: tbo:Thebr_0363 cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.423
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
    0.421
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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