STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77940.1Rhomboid family protein; PFAM: Peptidase S54, rhomboid; KEGG: thx:Thet_0375 rhomboid family protein. (227 aa)    
Predicted Functional Partners:
AEM77935.1
Band 7 protein; KEGG: tte:TTE0384 membrane protease subunit stomatin/prohibitin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein.
   
 0.839
AEM78157.1
Cell wall hydrolase/autolysin; KEGG: tit:Thit_0595 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Copper amine oxidase-like, N-terminal; SMART: Cell wall hydrolase/autolysin, catalytic.
  
   0.665
AEM79702.1
Manually curated; PFAM: Cell wall hydrolase/autolysin, catalytic.
  
   0.665
AEM79548.1
TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: Cell wall hydrolase/autolysin, catalytic; KEGG: tbo:Thebr_0460 N-acetylmuramoyl-L-alanine amidase CwlD; SMART: Cell wall hydrolase/autolysin, catalytic.
  
   0.610
polA
5'-3' exonuclease, resolvase-like domain-containing protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
    0.403
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.