STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM77980.1KEGG: tbo:Thebr_1879 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (509 aa)    
Predicted Functional Partners:
AEM77981.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: tbo:Thebr_1878 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
AEM77982.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: tmt:Tmath_0517 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
AEM77979.1
PFAM: Basic membrane lipoprotein; KEGG: tbo:Thebr_1880 basic membrane lipoprotein.
 
 
 0.995
AEM77984.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.823
AEM77983.1
Transcriptional regulator, GntR family with UTRA sensor domain; KEGG: tbo:Thebr_1876 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
    0.781
AEM77986.1
KEGG: tbo:Thebr_1873 pyrimidine-nucleoside phosphorylase; TIGRFAM: Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Pyrimidine nucleoside phosphorylase, C-terminal.
     
 0.685
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
    0.676
AEM79457.1
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: str:Sterm_3539 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.506
AEM77987.1
Hypothetical protein; Manually curated; KEGG: tmt:Tmath_0522 methyl-accepting chemotaxis sensory transducer.
   
   0.416
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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