STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78019.1TIGRFAM: flagellar operon protein TIGR03826; KEGG: tbo:Thebr_1832 flagellar operon protein YvyF. (147 aa)    
Predicted Functional Partners:
AEM78021.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1830 FlgN family protein.
 
  
 0.982
AEM78020.1
PFAM: Anti-sigma-28 factor, FlgM; KEGG: tbo:Thebr_1831 anti-sigma-28 factor FlgM family protein.
  
 
 0.942
AEM78024.1
KEGG: tbo:Thebr_1827 hypothetical protein.
 
  
 0.899
flgK
KEGG: tbo:Thebr_1829 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal.
 
  
 0.888
AEM78023.1
KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal.
 
  
 0.831
AEM79154.1
KEGG: thx:Thet_1694 hypothetical protein.
   
 0.830
fliW
Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
    0.797
AEM78018.1
PFAM: Phosphoribosyltransferase; KEGG: tbo:Thebr_1833 phosphoribosyltransferase.
  
    0.788
AEM77615.1
PFAM: Protein of unknown function DUF327; KEGG: tbo:Thebr_2195 hypothetical protein.
 
     0.784
AEM79826.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: slp:Slip_1153 copper amine oxidase domain protein.
  
 0.774
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.