Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEM78023.1 | AEM78024.1 | Thewi_0564 | Thewi_0565 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | KEGG: tbo:Thebr_1827 hypothetical protein. | 0.907 |
| AEM78023.1 | AEM78027.1 | Thewi_0564 | Thewi_0568 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.809 |
| AEM78023.1 | AEM78038.1 | Thewi_0564 | Thewi_0581 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | PFAM: Flagellar protein FlaG protein; KEGG: tbo:Thebr_1817 flagellar protein FlaG protein. | 0.732 |
| AEM78023.1 | AEM78040.1 | Thewi_0564 | Thewi_0583 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | KEGG: tbo:Thebr_1815 flagellar protein FliS; manually curated; PFAM: Flagellar protein FliS. | 0.987 |
| AEM78023.1 | AEM78243.1 | Thewi_0564 | Thewi_0806 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.655 |
| AEM78023.1 | AEM78806.1 | Thewi_0564 | Thewi_1384 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: tbo:Thebr_1273 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); CheC-like protein. | 0.966 |
| AEM78023.1 | AEM78807.1 | Thewi_0564 | Thewi_1385 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | KEGG: tbo:Thebr_1274 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA). | 0.969 |
| AEM78023.1 | csrA | Thewi_0564 | Thewi_0567 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.897 |
| AEM78023.1 | flgK | Thewi_0564 | Thewi_0563 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | KEGG: tbo:Thebr_1829 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal. | 0.997 |
| AEM78023.1 | fliW | Thewi_0564 | Thewi_0566 | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.985 |
| AEM78024.1 | AEM78023.1 | Thewi_0565 | Thewi_0564 | KEGG: tbo:Thebr_1827 hypothetical protein. | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | 0.907 |
| AEM78024.1 | AEM78027.1 | Thewi_0565 | Thewi_0568 | KEGG: tbo:Thebr_1827 hypothetical protein. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.580 |
| AEM78024.1 | AEM78038.1 | Thewi_0565 | Thewi_0581 | KEGG: tbo:Thebr_1827 hypothetical protein. | PFAM: Flagellar protein FlaG protein; KEGG: tbo:Thebr_1817 flagellar protein FlaG protein. | 0.488 |
| AEM78024.1 | csrA | Thewi_0565 | Thewi_0567 | KEGG: tbo:Thebr_1827 hypothetical protein. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.834 |
| AEM78024.1 | flgK | Thewi_0565 | Thewi_0563 | KEGG: tbo:Thebr_1827 hypothetical protein. | KEGG: tbo:Thebr_1829 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal. | 0.875 |
| AEM78024.1 | fliW | Thewi_0565 | Thewi_0566 | KEGG: tbo:Thebr_1827 hypothetical protein. | Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.892 |
| AEM78027.1 | AEM78023.1 | Thewi_0568 | Thewi_0564 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: tbo:Thebr_1828 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; Flagellin, C-terminal. | 0.809 |
| AEM78027.1 | AEM78024.1 | Thewi_0568 | Thewi_0565 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: tbo:Thebr_1827 hypothetical protein. | 0.580 |
| AEM78027.1 | AEM78038.1 | Thewi_0568 | Thewi_0581 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | PFAM: Flagellar protein FlaG protein; KEGG: tbo:Thebr_1817 flagellar protein FlaG protein. | 0.663 |
| AEM78027.1 | AEM78040.1 | Thewi_0568 | Thewi_0583 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: tbo:Thebr_1815 flagellar protein FliS; manually curated; PFAM: Flagellar protein FliS. | 0.982 |
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