STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78034.1TIGRFAM: Methyltransferase FkbM; KEGG: methyltransferase FkbM family. (262 aa)    
Predicted Functional Partners:
AEM78035.1
KEGG: tte:TTE0501 cell wall biosynthesis glycosyltransferase; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
 
     0.914
AEM78251.1
NERD domain protein; PFAM: NERD; KEGG: tte:TTE0673 hypothetical protein.
  
     0.548
AEM78562.1
KEGG: tmt:Tmath_0097 hypothetical protein.
  
     0.438
AEM79269.1
KEGG: cob:COB47_2256 plasmid pRiA4b ORF-3 family protein.
  
     0.423
AEM78921.1
KEGG: tmt:Tmath_1408 hypothetical protein.
  
     0.420
AEM79150.1
PFAM: Deoxyribonuclease/rho motif-related TRAM; Methyltransferase small; KEGG: tbo:Thebr_0722 TrmA family RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.408
AEM79175.1
KEGG: tbo:Thebr_0704 TrmA family RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.408
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.