STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78035.1KEGG: tte:TTE0501 cell wall biosynthesis glycosyltransferase; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat. (1519 aa)    
Predicted Functional Partners:
AEM78034.1
TIGRFAM: Methyltransferase FkbM; KEGG: methyltransferase FkbM family.
 
     0.914
AEM78251.1
NERD domain protein; PFAM: NERD; KEGG: tte:TTE0673 hypothetical protein.
  
     0.769
AEM78921.1
KEGG: tmt:Tmath_1408 hypothetical protein.
  
     0.762
AEM77594.1
KEGG: tit:Thit_0062 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; Fibronectin, type III; Glycoside hydrolase, carbohydrate-binding; S-layer homology region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; Alpha-amylase, C-terminal all beta; Fibronectin, type III; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.580
AEM79269.1
KEGG: cob:COB47_2256 plasmid pRiA4b ORF-3 family protein.
  
     0.556
AEM77630.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: 4-oxalocrotonate tautomerase.
  
     0.528
AEM77761.1
Protein of unknown function UPF0236; KEGG: tbo:Thebr_1708 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0236.
  
 
   0.522
AEM79107.1
Protein of unknown function UPF0236; PFAM: Uncharacterised protein family UPF0236; KEGG: tbo:Thebr_1708 hypothetical protein.
  
 
   0.522
AEM79542.1
PFAM: UspA; KEGG: tbo:Thebr_0466 UspA domain-containing protein.
  
   
 0.502
AEM78700.1
KEGG: tbo:Thebr_1708 hypothetical protein.
  
 
   0.497
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.