STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78048.1KEGG: tbo:Thebr_1806 hypothetical protein. (213 aa)    
Predicted Functional Partners:
AEM78050.1
KEGG: thx:Thet_0524 hypothetical protein.
 
     0.849
AEM78049.1
TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: tit:Thit_0514 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region.
 
     0.666
AEM77840.1
KEGG: tmt:Tmath_0357 hypothetical protein.
  
     0.619
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.557
AEM79100.1
PFAM: Small acid-soluble spore protein, alpha/beta-type; KEGG: thx:Thet_1610 small acid-soluble spore protein alpha/beta type.
  
     0.521
AEM78051.1
3H domain-containing protein; PFAM: 3H domain; Helix-turn-helix, type 11; KEGG: thx:Thet_0525 3H domain-containing protein.
 
     0.510
AEM78538.1
KEGG: tpd:Teth39_0987 hypothetical protein.
  
     0.453
AEM79028.1
KEGG: thx:Thet_0909 hypothetical protein.
  
     0.417
AEM77584.1
PFAM: Beta-galactosidase trimerisation; Glycoside hydrolase, family 5; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.414
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.