STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78057.1PFAM: SNARE associated Golgi protein; KEGG: tbo:Thebr_1796 SNARE associated Golgi protein-like protein. (285 aa)    
Predicted Functional Partners:
AEM78058.1
PFAM: Amidohydrolase 1; KEGG: tbo:Thebr_1795 amidohydrolase.
       0.779
AEM78056.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: tmt:Tmath_0589 copper amine oxidase domain protein.
       0.441
arcA-2
KEGG: tbo:Thebr_1794 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase.
  
    0.411
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.