STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78058.1PFAM: Amidohydrolase 1; KEGG: tbo:Thebr_1795 amidohydrolase. (383 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.787
hutH
TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: tbo:Thebr_1523 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase.
  
  
 0.787
AEM78057.1
PFAM: SNARE associated Golgi protein; KEGG: tbo:Thebr_1796 SNARE associated Golgi protein-like protein.
       0.779
AEM79655.1
KEGG: tbo:Thebr_0334 peptidase S9 prolyl oligopeptidase.
 
     0.495
AEM78055.1
Manually curated; PFAM: Tex-like protein, N-terminal; KEGG: thx:Thet_0529 Tex-like protein protein-like protein; SMART: Resolvase, RNase H-like fold.
       0.486
AEM78712.1
Agmatinase; KEGG: tbo:Thebr_1172 agmatinase; TIGRFAM: Putative agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
  
 0.443
AEM78056.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: tmt:Tmath_0589 copper amine oxidase domain protein.
       0.441
AEM79392.1
PFAM: Peptidase M19, renal dipeptidase; KEGG: tit:Thit_1811 membrane dipeptidase.
 
     0.425
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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