Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arcA-2KEGG: tbo:Thebr_1794 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase. (408 aa)    
Predicted Functional Partners:
AEM78060.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.987
arcA
KEGG: tbo:Thebr_2192 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase.
 
  
0.924
argG
TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: thx:Thet_2262 argininosuccinate synthase; PFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
  0.903
argH
TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: tmt:Tmath_2083 argininosuccinate lyase; PFAM: Fumarate lyase.
     
  0.900
AEM78061.1
KEGG: tbo:Thebr_1792 carbamate kinase; TIGRFAM: Bacterial carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase.
 
   
 0.878
AEM78556.1
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_1022 Orn/Lys/Arg decarboxylase major region.
     
 0.806
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.561
AEM78057.1
PFAM: SNARE associated Golgi protein; KEGG: tbo:Thebr_1796 SNARE associated Golgi protein-like protein.
  
    0.413
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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