STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcA-2KEGG: tbo:Thebr_1794 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase. (408 aa)    
Predicted Functional Partners:
AEM78060.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.987
arcA
KEGG: tbo:Thebr_2192 arginine deiminase; HAMAP: Arginine deiminase; PFAM: Amidinotransferase.
 
  
0.924
argG
TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: thx:Thet_2262 argininosuccinate synthase; PFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
  0.903
argH
TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: tmt:Tmath_2083 argininosuccinate lyase; PFAM: Fumarate lyase.
     
  0.900
AEM78061.1
KEGG: tbo:Thebr_1792 carbamate kinase; TIGRFAM: Bacterial carbamate kinase; PFAM: Aspartate/glutamate/uridylate kinase.
 
   
 0.876
AEM78613.1
Hypothetical protein; Manually curated; KEGG: tmt:Tmath_1092 alanine racemase domain protein.
 
  
  0.836
AEM78556.1
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: tbo:Thebr_1022 Orn/Lys/Arg decarboxylase major region.
     
 0.807
AEM78057.1
PFAM: SNARE associated Golgi protein; KEGG: tbo:Thebr_1796 SNARE associated Golgi protein-like protein.
  
    0.411
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.