STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78080.1PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: tte:TTE0550 transcriptional regulator; SMART: ATPase, AAA+ type, core. (468 aa)    
Predicted Functional Partners:
AEM79091.1
KEGG: tbo:Thebr_0751 RNA polymerase sigma-54 factor, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54.
 
   
 0.797
AEM78079.1
TIGRFAM: Thiolase; KEGG: tte:TTE0549 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.503
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.463
AEM79347.1
Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Iron hydrogenase, large subunit, C-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Putative Fe-S cluster; PAS fold; KEGG: tte:TTE0697 ferredoxin 2; SMART: PAS.
 
    
 0.453
AEM78081.1
PFAM: MaoC-like dehydratase; KEGG: tte:TTE0551 acyl dehydratase.
       0.436
AEM78077.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; KEGG: tte:TTE0548 3-hydroxybutyryl-CoA dehydrogenase.
       0.410
AEM79842.1
KEGG: tit:Thit_2175 putative PAS/PAC sensor protein; manually curated; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
 
    
 0.408
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.