STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78095.1KEGG: tbo:Thebr_1780 hypothetical protein. (152 aa)    
Predicted Functional Partners:
AEM78096.1
Two component transcriptional regulator, LytTR family; KEGG: tbo:Thebr_1779 LytTr DNA-binding region; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
       0.717
AEM78098.1
KEGG: thx:Thet_0550 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B.
       0.674
AEM78097.1
KEGG: thx:Thet_0549 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
       0.668
buk
TIGRFAM: Butyrate kinase; HAMAP: butyrate kinase; KEGG: tbo:Thebr_0474 butyrate kinase; PFAM: Acetate/butyrate kinase; Belongs to the acetokinase family.
       0.500
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.