Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78135.1KEGG: tbo:Thebr_1744 stage V sporulation protein B; TIGRFAM: Sporulation stage V, protein B; PFAM: Polysaccharide biosynthesis protein. (518 aa)    
Predicted Functional Partners:
AEM79431.1
KEGG: tit:Thit_1852 hypothetical protein.
  
     0.625
AEM78620.1
PFAM: Protein of unknown function DUF965, bacterial; KEGG: tit:Thit_1042 protein of unknown function DUF965; Belongs to the UPF0297 family.
  
     0.572
AEM79620.1
RNA polymerase, sigma-24 subunit, SigH, ECF subfamily; KEGG: tbo:Thebr_0367 RNA polymerase sigma-H factor; TIGRFAM: RNA polymerase sigma-H type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2.
  
    0.570
AEM78136.1
KEGG: tbo:Thebr_1743 biotin and thiamin synthesis associated; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
       0.566
AEM78840.1
UPF0122 protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.512
AEM79080.1
PFAM: Protein of unknown function DUF633; KEGG: tbo:Thebr_0762 hypothetical protein.
  
     0.491
AEM78011.1
PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; KEGG: tmt:Tmath_0547 spore germination protein-like protein.
  
    0.488
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
     0.471
AEM79894.1
Stage V sporulation protein T; KEGG: tmt:Tmath_2137 transcriptional regulator, AbrB family; TIGRFAM: Sporulation stage V, protein T; Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted.
 
   
 0.463
AEM80020.1
PFAM: Protein of unknown function DUF951, bacterial; KEGG: tbo:Thebr_2321 hypothetical protein.
  
     0.455
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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