Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78150.1ABC-type transporter, periplasmic subunit; KEGG: tte:TTE0611 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components; manually curated; PFAM: Bacterial extracellular solute-binding protein, family 5. (549 aa)    
Predicted Functional Partners:
AEM78151.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0612 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.995
AEM78152.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0613 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.990
AEM78153.1
TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tte:TTE0614 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
 
 0.990
AEM78154.1
Hypothetical protein; Manually curated; Belongs to the ABC transporter superfamily.
 
 
 0.988
AEM79361.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: tte:TTE1552 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
  
  
 
0.903
AEM78149.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: tte:TTE0609 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
  
  
 
0.901
AEM79866.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tit:Thit_2209 binding-protein-dependent transport systems inner membrane component.
 
 
 0.852
AEM79867.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tmt:Tmath_2116 binding-protein-dependent transport systems inner membrane component.
 
  
 0.781
AEM77890.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tmt:Tmath_0385 binding-protein-dependent transport systems inner membrane component.
 
 
 0.711
AEM79868.1
TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tbo:Thebr_0205 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: ATPase, AAA+ type, core.
 
  
 0.709
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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