STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78155.1KEGG: tte:TTE0616 hypothetical protein. (48 aa)    
Predicted Functional Partners:
AEM78154.1
Hypothetical protein; Manually curated; Belongs to the ABC transporter superfamily.
       0.604
AEM78153.1
TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tte:TTE0614 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
       0.598
AEM78151.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0612 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.585
AEM78152.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0613 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.585
AEM78150.1
ABC-type transporter, periplasmic subunit; KEGG: tte:TTE0611 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components; manually curated; PFAM: Bacterial extracellular solute-binding protein, family 5.
       0.400
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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