| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEM78159.1 | AEM78160.1 | Thewi_0706 | Thewi_0707 | Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Phosphodiesterase, MJ0936 family; KEGG: tbo:Thebr_1722 phosphodiesterase; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase. | 0.963 |
| AEM78159.1 | rph | Thewi_0706 | Thewi_0705 | Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.991 |
| AEM78160.1 | AEM78159.1 | Thewi_0707 | Thewi_0706 | Phosphodiesterase, MJ0936 family; KEGG: tbo:Thebr_1722 phosphodiesterase; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase. | Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.963 |
| AEM78160.1 | rph | Thewi_0707 | Thewi_0705 | Phosphodiesterase, MJ0936 family; KEGG: tbo:Thebr_1722 phosphodiesterase; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.861 |
| AEM78731.1 | AEM79609.1 | Thewi_1308 | Thewi_2261 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | 0.731 |
| AEM78731.1 | rnr | Thewi_1308 | Thewi_1068 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.624 |
| AEM78731.1 | rph | Thewi_1308 | Thewi_0705 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.887 |
| AEM78731.1 | rpsD | Thewi_1308 | Thewi_2228 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
| AEM78731.1 | rpsE | Thewi_1308 | Thewi_2238 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.995 |
| AEM78731.1 | rpsK | Thewi_1308 | Thewi_2229 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
| AEM79508.1 | dnaG | Thewi_2159 | Thewi_1682 | TOPRIM domain-containing protein; KEGG: chy:CHY_2640 DNA primase, internal deletion; PFAM: Toprim domain; DNA primase, catalytic core, N-terminal; SMART: Toprim domain, subgroup. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.900 |
| AEM79508.1 | rph | Thewi_2159 | Thewi_0705 | TOPRIM domain-containing protein; KEGG: chy:CHY_2640 DNA primase, internal deletion; PFAM: Toprim domain; DNA primase, catalytic core, N-terminal; SMART: Toprim domain, subgroup. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.724 |
| AEM79609.1 | AEM78731.1 | Thewi_2261 | Thewi_1308 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tbo:Thebr_1199 RNA-binding S1 domain-containing protein. | 0.731 |
| AEM79609.1 | rnr | Thewi_2261 | Thewi_1068 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.405 |
| AEM79609.1 | rph | Thewi_2261 | Thewi_0705 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.639 |
| AEM79609.1 | rpsD | Thewi_2261 | Thewi_2228 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.966 |
| AEM79609.1 | rpsE | Thewi_2261 | Thewi_2238 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.967 |
| AEM79609.1 | rpsK | Thewi_2261 | Thewi_2229 | PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: tbo:Thebr_0378 50S ribosomal protein L7Ae/L30e/S12e/Gadd45. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.967 |
| dnaG | AEM79508.1 | Thewi_1682 | Thewi_2159 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | TOPRIM domain-containing protein; KEGG: chy:CHY_2640 DNA primase, internal deletion; PFAM: Toprim domain; DNA primase, catalytic core, N-terminal; SMART: Toprim domain, subgroup. | 0.900 |
| dnaG | rph | Thewi_1682 | Thewi_0705 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.724 |
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