Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEM78208.1KEGG: cob:COB47_2236 transposase, IS605 OrfB family; manually curated; PFAM: Transposase, probable, IS891/IS1136/IS1341. (373 aa)    
Predicted Functional Partners:
AEM78207.1
Transposase IS200-family protein; PFAM: Transposase IS200-like; KEGG: chd:Calhy_0470 transposase IS200-family protein.
 
   
 0.959
AEM79411.1
Resolvase domain-containing protein; KEGG: tte:TTE0741 site-specific integrase-resolvase; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR.
 
  
 0.772
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
   0.513
AEM78206.1
PFAM: O-antigen ligase-related; Tetratricopeptide TPR-1; KEGG: tmt:Tmath_0704 O-antigen polymerase.
       0.430
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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