Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEM78211.1SMART: ATPase, AAA+ type, core; KEGG: tbo:Thebr_0433 AAA ATPase. (266 aa)    
Predicted Functional Partners:
AEM78212.1
PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: tbo:Thebr_0060 integrase catalytic subunit.
 
     0.933
AEM78213.1
KEGG: tbo:Thebr_1451 hypothetical protein.
 
     0.773
AEM78254.1
KEGG: tbo:Thebr_0060 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core.
 
     0.762
AEM78560.1
PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: tbo:Thebr_0060 integrase catalytic subunit.
 
     0.762
AEM78929.1
PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: tbo:Thebr_0060 integrase catalytic subunit.
 
     0.762
AEM79464.1
PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: tbo:Thebr_1919 integrase catalytic subunit.
 
     0.762
AEM79939.1
PFAM: Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG: tbo:Thebr_0060 integrase catalytic subunit.
 
     0.762
AEM79112.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_0060 integrase catalytic subunit.
 
     0.761
AEM79111.1
Hypothetical protein; Manually curated; KEGG: tbo:Thebr_1451 hypothetical protein.
  
     0.595
AEM78032.1
Hypothetical protein; Manually curated; KEGG: tmt:Tmath_1857 hypothetical protein.
  
     0.594
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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