STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78215.1KEGG: ttm:Tthe_2548 hypothetical protein. (77 aa)    
Predicted Functional Partners:
AEM78214.1
KEGG: ttm:Tthe_2549 hypothetical protein.
 
     0.938
AEM78241.1
Protein of unknown function UPF0236; PFAM: Uncharacterised protein family UPF0236; KEGG: tbo:Thebr_1708 hypothetical protein.
  
     0.566
AEM77761.1
Protein of unknown function UPF0236; KEGG: tbo:Thebr_1708 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0236.
  
     0.522
AEM79107.1
Protein of unknown function UPF0236; PFAM: Uncharacterised protein family UPF0236; KEGG: tbo:Thebr_1708 hypothetical protein.
  
     0.522
AEM78700.1
KEGG: tbo:Thebr_1708 hypothetical protein.
  
     0.508
AEM79654.1
PFAM: Protein of unknown function DUF1614; KEGG: tbo:Thebr_0335 hypothetical protein.
  
     0.499
AEM78216.1
PFAM: AAA-ATPase-like; Protein of unknown function DUF1703; KEGG: thx:Thet_0645 AAA-ATPase-like protein.
       0.417
AEM79102.1
PFAM: Iron dependent repressor; KEGG: tbo:Thebr_0741 iron dependent repressor.
  
     0.408
AEM78976.1
KEGG: thx:Thet_0959 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
  
     0.405
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.