Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEM78217.1KEGG: tmt:Tmath_0712 hypothetical protein. (350 aa)    
Predicted Functional Partners:
AEM78216.1
PFAM: AAA-ATPase-like; Protein of unknown function DUF1703; KEGG: thx:Thet_0645 AAA-ATPase-like protein.
 
     0.699
AEM79919.1
TIGRFAM: Protein of unknown function DUF132; PFAM: PilT protein, N-terminal; KEGG: tmt:Tmath_2166 PilT protein domain protein; SMART: Nucleotide binding protein, PINc.
  
     0.583
AEM78265.1
Protein of unknown function DUF132; KEGG: tbo:Thebr_1653 nucleotide-binding protein PINc; TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc.
  
     0.556
AEM79722.1
PFAM: Protein of unknown function DUF2442; KEGG: tmt:Tmath_2039 protein of unknown function DUF2442.
  
     0.513
AEM78210.1
PFAM: AAA-ATPase-like; Protein of unknown function DUF1703; KEGG: tbo:Thebr_1680 AAA-ATPase-like protein.
  
     0.488
AEM78218.1
KEGG: toc:Toce_0502 nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal.
       0.481
AEM78219.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2482 NAD-dependent epimerase/dehydratase.
       0.481
AEM79723.1
KEGG: tbo:Thebr_0089 hypothetical protein.
  
     0.463
AEM79491.1
KEGG: thx:Thet_2400 hypothetical protein.
  
     0.437
AEM78214.1
KEGG: ttm:Tthe_2549 hypothetical protein.
 
     0.423
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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