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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78245.1KEGG: tit:Thit_0658 hypothetical protein. (540 aa)    
Predicted Functional Partners:
AEM78246.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tit:Thit_0659 OmpA/MotB domain protein.
 
    0.944
AEM78248.1
Manually curated; PFAM: SNF2-related; KEGG: tit:Thit_0661 SNF2-related protein; SMART: DEAD-like helicase, N-terminal.
 
 
 0.933
AEM79154.1
KEGG: thx:Thet_1694 hypothetical protein.
   
 0.830
AEM78247.1
KEGG: tit:Thit_0660 hypothetical protein.
       0.794
AEM79826.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: slp:Slip_1153 copper amine oxidase domain protein.
   
 0.696
AEM79369.1
KEGG: thx:Thet_1888 beta-lactamase domain-containing protein.
    
 0.682
AEM79924.1
PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: tit:Thit_2264 RNA-metabolising metallo-beta-lactamase.
    
 0.682
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 0.680
AEM78020.1
PFAM: Anti-sigma-28 factor, FlgM; KEGG: tbo:Thebr_1831 anti-sigma-28 factor FlgM family protein.
  
 
 0.673
AEM78451.1
PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; KEGG: tte:TTE0934 metal-dependent hydrolase.
   
 0.672
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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