Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
rtcBProtein of unknown function UPF0027; PFAM: Uncharacterised protein family UPF0027; KEGG: tit:Thit_0712 protein of unknown function UPF0027; Belongs to the RtcB family. (487 aa)    
Predicted Functional Partners:
AEM78264.1
KEGG: tbo:Thebr_1654 hypothetical protein.
       0.443
AEM78265.1
Protein of unknown function DUF132; KEGG: tbo:Thebr_1653 nucleotide-binding protein PINc; TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc.
       0.443
AEM79995.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; KEGG: thx:Thet_2406 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.423
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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