STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM78268.1YcfA family protein; PFAM: YcfA-like; KEGG: ate:Athe_2005 YcfA family protein. (73 aa)    
Predicted Functional Partners:
AEM78267.1
PFAM: Uncharacterised protein family UPF0150; KEGG: tmt:Tmath_0737 protein of unknown function UPF0150.
 
 
 
 0.991
AEM79724.1
PFAM: Uncharacterised protein family UPF0150; KEGG: tmt:Tmath_0096 protein of unknown function UPF0150.
 
 
 
 0.910
AEM78269.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: tmt:Tmath_0739 4-oxalocrotonate tautomerase.
       0.675
AEM78266.1
PFAM: Nucleotidyltransferase; KEGG: tbo:Thebr_1652 DNA polymerase beta domain-containing protein region.
       0.584
AEM78368.1
PFAM: Protein of unknown function DUF86; KEGG: tbo:Thebr_1517 hypothetical protein.
 
     0.547
AEM78214.1
KEGG: ttm:Tthe_2549 hypothetical protein.
  
     0.540
AEM78275.1
PFAM: Protein of unknown function DUF86; KEGG: tbo:Thebr_1598 hypothetical protein.
 
     0.501
AEM78274.1
PFAM: Nucleotidyltransferase; KEGG: tbo:Thebr_1599 DNA polymerase beta domain-containing protein region.
 
     0.482
AEM78265.1
Protein of unknown function DUF132; KEGG: tbo:Thebr_1653 nucleotide-binding protein PINc; TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc.
 
     0.474
AEM78270.1
KEGG: thx:Thet_0686 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02677; PFAM: Conserved hypothetical protein CHP02677.
       0.422
Your Current Organism:
Thermoanaerobacter wiegelii
NCBI taxonomy Id: 697303
Other names: T. wiegelii Rt8.B1, Thermoanaerobacter wiegelii Rt8.B1, Thermoanaerobacter wiegelii str. Rt8.B1, Thermoanaerobacter wiegelii strain Rt8.B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.